CDS

Accession Number TCMCG066C06043
gbkey CDS
Protein Id XP_034583674.1
Location complement(join(14914486..14914527,14914607..14914678,14915130..14915294,14915834..14915878,14916229..14916360,14916753..14916851,14917033..14917128,14917468..14917649,14917958..14918210,14918595..14918702,14918772..14918829,14919169..14919320,14919403..14919497,14919977..14920092,14920170..14920296,14920369..14920465,14920626..14920794,14921647..14921795))
Gene LOC117846562
GeneID 117846562
Organism Setaria viridis

Protein

Length 718aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034727783.1
Definition cleavage and polyadenylation specificity factor subunit 2 isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category A
Description Cleavage and polyadenylation factor 2 C-terminal
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14402        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGACGTCGGTGCAGGTGACGCCTCTCAGCGGGGCGTACGGGGAGGGGCCCCTGTGCTACCTGCTCGCCGTCGACGGCTTCCGCTTCCTCCTCGACTGCGGATGGACCGACCTCTGCGACACCTCCCAACTCCAAGCCCTCGCCAAGGTTGCACCAACTATAGATGCTGTTCTTTTGTCACATCCTGACATGATGCATCTAGGAGCTTTGCCTTATGCTATGAAACATCTTGGACTCTCTGCACCAGTTTATGCAACAGAACCTGTGTTTAGACTTGGCCTTTTGACCATGTACGACCATTTTCTATCTCGATGGCAAGTCTCAGACTTTGACTTGTTTACTTTGGATGATGTTGATGCTGCATTCCAAAACATTGTGAGATTGAAATACTCACAAAATTACCTTCTGAATGATAAAGGTGAAGGAATTGTTATTGCTCCCCATGTGGCTGGGCATCTTTTGGGGGGCACAGTGTGGAAGATAACAAAAGATGGAGAGGATGTTGTGTACGCTGTTGACTTCAACCATCGGAAAGAGATGCATTTGAATGGTACTGTTCTTGGATCTTTTGTGCGGCCAGCTGTTCTGATAACTGATGCTTACAACGCTTTGAACAATCAAGGCTACAGAAAGAAACAGGATCAAGATTTCATTGATTCATTAGTTAAAGTTCTAGGAAGTGGTGGAAGTGTGTTACTTCCTGTTGATACTGCTGGTAGAGTGTTGGAACTTCTTTTGATATTGGATAAGTATTGGGGTGACCGGCGTTTGGAGTACCCTATCTACTTTCTGACAAATGTTTCTACAAGTACAGTCGACTATGTCAAGAGTTTTCTTGAATGGATGGGTGATCATATTGCAAAATCTTTTGAAAGCAGTAGAGCTAATGCCTTCTTATTAAAAAAGGTCACACTGATAATTAACAAAGAAGATCTTGAAAAGTTGGGAGATACTCCAAAGGTGGTTCTGGCGTCCATGGCAAGTTTGGAGGTTGGCTTTTCTCATGACATATTTGTTGAGATGGCGAATGAAGCAAGGAATCTAGTGCTCTTTACTGAGAAGGGACAGTTTGGTACACTTGCTCGAATGCTTCAAGTGGACCCACCCCCTAAAGCTGTAAAGGTCACTATGAGCAAGCGAATTCCTTTGGTGGGTGATGAGCTAAAAGCTTATGAAGAAGAACAGGAACGGATCAAAAAGGAAGAAGCAATCAAGGCTAGCCTTGTCAAAGAAGAGGAACTAAAGGCTTCCCATGGATCAAATGCAAAGGCTTCAGACCCAATGCTCATTGATTCAAGCTCATCTCGTAAATCCACCAAGGCTGGTTCACATTTTGGTGGGAGCAATGATATTTTCATTGATGGATTTGTCCCTCCTTCAACCAGTGTTGCTCCAATGTTTCCCTTCTTTGAAAATACTGCCGAATGGGATGACTTTGGTGAGGTCATCAATCCTGATGATTATACGATGAAACAAGAAGAAATGGATAGTACTCTGATGCTTGGTTCTGGAGATGGTTTAGATGGTAAAATTGACGATGGTTCAGCACGCCTGCTTCTTGATTCAACGCCCTCAAAAGTTATTTCCAATGAGATGACTGTTCAAGTGAAATGCTCATTGGTTTATATGGACTTTGAAGGTCGCTCTGATGGGCGTTCTGTAAAGTCAGTTATAGCTCATGTGGCTCCACTGAAACTTGTTTTGGTGCATGGATCAGCGGAAGCTACTGAACATTTGAAAATGCATTGTGCAAAGAATTTAGACTTGCATGTTTATGCTCCTCAGATTGAGGAAACAATTGATGTAACATCGGATTTATGTGCCTATAAGGTACAACTTTCAGAGAAGTTAATGAGTAACATTATTTGTAAAAAGTTGGGTGAGCATGAAATTGCTTGGGTGGATGCAGAAGTTGGAAAAGAAGATGAAAAGCTTATTCTGCTTCCCCCATCGTCAAAACCGCCACCCCACAAGCCAGTTCTTGTGGGTGATCTAAAGTTGTCTGATTTTAAACAATTTCTGGAAAATAAAGGTTGGCAGGTTGAATTTTCCGGTGGTGCATTACGGTGTGGCGAACACATCACGGTGCGCAAGATTGGTGACTCCCAGAAGTTGTTCATGGACAAACTGCCCATGGCAAAGCAGACACTTTGA
Protein:  
MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDTSQLQALAKVAPTIDAVLLSHPDMMHLGALPYAMKHLGLSAPVYATEPVFRLGLLTMYDHFLSRWQVSDFDLFTLDDVDAAFQNIVRLKYSQNYLLNDKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKEMHLNGTVLGSFVRPAVLITDAYNALNNQGYRKKQDQDFIDSLVKVLGSGGSVLLPVDTAGRVLELLLILDKYWGDRRLEYPIYFLTNVSTSTVDYVKSFLEWMGDHIAKSFESSRANAFLLKKVTLIINKEDLEKLGDTPKVVLASMASLEVGFSHDIFVEMANEARNLVLFTEKGQFGTLARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEAIKASLVKEEELKASHGSNAKASDPMLIDSSSSRKSTKAGSHFGGSNDIFIDGFVPPSTSVAPMFPFFENTAEWDDFGEVINPDDYTMKQEEMDSTLMLGSGDGLDGKIDDGSARLLLDSTPSKVISNEMTVQVKCSLVYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCAKNLDLHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNIICKKLGEHEIAWVDAEVGKEDEKLILLPPSSKPPPHKPVLVGDLKLSDFKQFLENKGWQVEFSGGALRCGEHITVRKIGDSQKLFMDKLPMAKQTL